BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G06SP1|AL427063
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig131 1403 0.0
3x_Contig1476 151 2e-36
>3x_Contig131
Length = 998
Score = 1403 bits (705), Expect = 0.0
Identities = 715/721 (99%)
Strand = Plus / Plus
Query: 100 catatatgagatttactgtaattattagtgagttgttactctatattcccgcagtaattt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catatatgagatttactgtaattattagtgagttgttactctatattcccgcagtaattt 60
Query: 160 actttaccaagtgggtcggaaaatatagatcgcaatccccaattggtcaatacattgctg 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actttaccaagtgggtcggaaaatatagatcgcaatccccaattggtcaatacattgctg 120
Query: 220 ctgctgctattctgttccagccagcgttgattttggtggatcatggacatttccaatata 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgctgctattctgttccagccagcgttgattttggtggatcatggacatttccaatata 180
Query: 280 actgcgtaatgttgggaatgacagtctacacattgaataatctgttagatgggttttacg 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actgcgtaatgttgggaatgacagtctacacattgaataatctgttagatgggttttacg 240
Query: 340 ctatgggagctatatgttttgtgctatcactttgttttaagcaaatggcactttattatt 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctatgggagctatatgttttgtgctatcactttgttttaagcaaatggcactttattatt 300
Query: 400 ctccaattttctttgcttatctattgagtaaatccacatactctccagggatcaacttac 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctccaattttctttgcttatctattgagtaaatccacatactctccagggatcaacttac 360
Query: 460 ctaggttatttgcgatctctgtttcaacagctcttgcattcattggttctttcggtccaa 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaggttatttgcgatctctgtttcaacagctcttgcattcattggttctttcggtccaa 420
Query: 520 tctatatctttggaggatacaagaacttagtgcaatcaatgcacaggatttttccatttg 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctatatctttggaggatacaagaacttagtgcaatcaatgcacaggatttttccatttg 480
Query: 580 ccaggggtatctttgaagataaagttgcgaatttttggtgcgtttctaatattttcmtca 639
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 481 ccaggggtatctttgaagataaagttgcgaatttttggtgcgtttctaatattttcatca 540
Query: 640 aatatagaaatctattcmctcagaaggatcttcaattatactcattactcgcaacagtta 699
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatatagaaatctattcactcagaaggatcttcaattatactcattactcgcaacagtta 600
Query: 700 ttgggcttttaccatcattcattatwacmtttttatacccgaagagacatttactaccat 759
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 601 ttgggcttttaccatcattcattatcaaatttttatacccgaagagacatttactaccat 660
Query: 760 atgctttggccgcatgttcgatgtcattcttcttattcagcttccaggttyatgaaaaga 819
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 661 atgctttggccgcatgttcgatgtcattcttcttattcagcttccaggttcatgaaaaga 720
Query: 820 c 820
|
Sbjct: 721 c 721
>3x_Contig1476
Length = 8689
Score = 151 bits (76), Expect = 2e-36
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 1 cttaccattcatatttattgggtaaactgggatcgtttttccgagaagggtggtttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cttaccattcatatttattgggtaaactgggatcgtttttccgagaagggtggtttgatc 19
Query: 61 tcgagtcatccagagg 76
||||||||||||||||
Sbjct: 18 tcgagtcatccagagg 3
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5961
Number of Sequences: 1807
Number of extensions: 5961
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 2
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)